第763回 生医研セミナー(多階層生体防御システム研究拠点)


下記の通り、Emmanuel Barillot 先生によるセミナーを開催致します。皆様方のご来聴を心より歓迎申し上げます。

※セミナーは英語で行われます。(Seminar in English)

演題 / Title

Computational oncology: is it data-driven or knowledge driven?

演者 / Speaker

Dr. Emmanuel Barillot
Director of Department
Institut Curie - INSERM U900 -
PSL Research University / Mines ParisTech, FRANCE

日時 / Date

2018年1月19日(金)  Jan. 19 (Fri), 2018
16:00~17:00

場所 / Venue

病院キャンパス 総合研究棟2F 204セミナー室
以下の地図の1番です。
(http://www.kyushu-u.ac.jp/f/30078/Hospital_jp-2017.pdf)

Seminar Room 204, 2F, Biomedical Research Station
No.1 on the following linked map.
(http://www.kyushu-u.ac.jp/f/30074/Hospital_en-2017.pdf)

要 旨 / Abstract

While molecular and phenotypic data about tumors and models are accumulating at an ever-increasing pace, the bottleneck in cancer research has shifted from data acquisition to computational analysis. What is missing to translate our research into clinical benefit for the patient? Should we focus on knowledge-driven or data-driven approaches? My talk will give examples of both, in particular for single cell analysis, knowledge formalisation and network modelling. Applications will concern among others: Ewing sarcoma, colon carcinoma, and metastasis formation.

業 績 / Publications

Stoll et al (2017) MaBoSS 2.0: an environment for stochastic Boolean modeling. Bioinformatics (Oxford, England) 33: 14. 2226-2228 Jul.

Servant et al (2015) HiC-Pro: an optimized and flexible pipeline for Hi-C data processing. Genome biology 16: 12.

Kuperstein et al (2015) Atlas of Cancer Signalling Network: a systems biology resource for integrative analysis of cancer data with Google Maps. Oncogenesis 4: 07.

Chanrion et al (2014) Concomitant Notch activation and p53 deletion trigger epithelial-to-mesenchymal transition and metastasis in mouse gut. Nature communications 5: 10.

Biton et al (2014) Independent component analysis uncovers the landscape of the bladder tumor transcriptome and reveals insights into luminal and Basal subtypes. Cell reports 9: 4. 1235-1245 Nov.

連絡先 / Contact

生体防御医学研究所 システムコホート学分野
山西 芳裕 092(642)6925

Division of System Cohort, MIB, Yoshihiro Yamanishi
Tel:092-642-6925