Publication List
2013
Original Research Papers
Li, Y., Miyanari, Y., Shirane, K., Nitta, H., Kubota, T., Ohashi, H., Okamoto, A. & Sasaki, H.
Sequence-specific microscopic visualization of DNA methylation status at satellite repeats in individual cell nuclei and chromosomes.
Nucl. Acids Res. 41, e186 (2013)
PubMed

Toh, H., Oshima, K., Nakano, A., Takahata, M., Murakami, M., Takaki, T., Nishiyama, H., Igimi, S., Hattori, M. & Morita, H.
Genomic adaptation of the Lactobacillus casei group.
PLoS One 8, e75073 (2013)
PubMed

Toh, H., Oshima, K., Suzuki, T., Hattori, M. & Morita, H.
Complete Genome Sequence of the Equol-Producing Bacterium Adlercreutzia equolifaciens DSM 19450T.
Genome Announc. 1, e00742-13 (2013)
PubMed

Kosaka, T., Toh, H. & Toyoda, A.
Complete Genome Sequence of a Thermophilic Hydrogenotrophic Methanogen, Methanothermobacter sp. Strain CaT2.
Genome Announc. 1, e00672-13 (2013)
PubMed

Umemori, J., Mori, A., Ichiyanagi, K., Uno, T. & Koide, T.
Identification of both copy number variation-type and constant-type core elements in a large segmental duplication region of the mouse genome.
BMC Genomics 14, 455 (2013)
PubMed

Nitta, H., Unoki, M., Ichiyanagi, K., Kosho, T., Shigemura, T., Takahashi, H., Velasco, G., Francastel, C., Picard, C., Kubota, T. & Sasaki, H.
Three novel ZBTB24 mutations identified in Japanese and Cape Verdean type 2 ICF syndrome patients.
J. Hum. Genet. 58, 455-460 (2013)
PubMed

Fukuda, K., Ichiyanagi, K., Yamada, Y., Go, Y., Udono, T., Wada, S., Maeda, T., Soejima, H., Saitou, N., Ito, T. & Sasaki, H.
Regional DNA methylation differences between humans and chimpanzees are associated with genetic changes, transcriptional divergence and disease genes.
J. Hum. Genet. 58, 446-454 (2013)
PubMed

Shirane, K., Toh, H., Kobayashi, H., Miura, F., Chiba, H., Ito, T., Kono, T. & Sasaki, H.
Mouse oocyte methylomes at base resolution reveal genome-wide accumulation of non-CpG methylation and role of DNA methyltransferases.
PLoS Genet. 9, e1003439 (2013)
PubMed

Fukao, M., Oshima, K., Morita, H., Toh, H., Suda, W., Kim, SW., Suzuki, S., Yakabe, T., Hattori, M. & Yajima N.
Genomic analysis by deep sequencing of the probiotic Lactobacillus brevis KB290 harboring nine plasmids reveals genomic stability.
PLoS One. 8, e60521 (2013)
PubMed

Unoki, M., Masuda, A., Dohmae, N., Arita, K., Yoshimatsu, M., Iwai, Y., Fukui, Y., Ueda, K., Hamamoto, R., Shirakawa, M., Sasaki, H. & Nakamura, Y.
Lysyl 5-hydroxylation, a novel histone modification, by Jumonji domain containing 6 (JMJD6).
J. Biol. Chem. 288, 6053-6062 (2013)
PubMed

Yamamoto, Y., Watanabe, T., Hoki, Y., Shirane, K., Li, Y., Ichiyanagi, K., Kuramochi-Miyagawa, S., Toyoda, A., Fujiyama, A., Oginuma, M., Suzuki, H., Sado, T., Nakano, T. & Sasaki, H.
Targeted gene silencing in mouse germ cells by insertion of a homologous DNA into a piRNA generating locus.
Genome Res. 23, 292-299 (2013)
PubMed

Ichiyanagi, T., Ichiyanagi, K., Miyake, M. & Sasaki, H.
Accumulation and loss of asymmetric non-CpG methylation during male germ-cell development.
Nucl. Acids Res. 41, 738-745 (2013)
PubMed

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Reviews
Sado, T. & Sakaguchi, T.
Species-specific differences in X chromosome inactivation in mammals.
Reproduction 146, R131-R139 (2013)
PubMed

Sado, T. & Brockdorff, N.
Advances in understanding chromosome silencing by the long non-coding RNA Xist.
Philos Trans R Soc Lond B Biol Sci. 368, (1609) 20110325 (2013)
PubMed

Ichiyanagi, K.
Epigenetic regulation of transcription and possible functions of mammalian short interspersed elements, SINEs.
Genes Genet. Syst. 88, 19-29 (2013)
PubMed

Ichiyanagi, K.
Transposable elements in eukaryotic genomes: epigenetic regulation by the host and functionalization for the host.
Genes Genet. Syst. 88, 1 (2013)
PubMed

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